Package index

Forest Objects

Extract and display data from random forest objects.

gg_rfsrc(<rfsrc>)

Predicted response data object

plot(<gg_rfsrc>)

Predicted response plot from a gg_rfsrc object.

Training Error

Visualize forest convergence and training error.

gg_error()

Random forest error trajectory data object

plot(<gg_error>)

Plot a gg_error object

Variable Importance

Assess and plot variable importance (VIMP).

gg_vimp()

Variable Importance (VIMP) data object

plot(<gg_vimp>)

Plot a gg_vimp object, extracted variable importance of a rfsrc object

Variable Dependence

Marginal variable dependence plots.

gg_variable()

Marginal variable dependence data object.

plot(<gg_variable>)

Plot a gg_variable object,

Partial Dependence

Partial dependence plots for individual variables.

gg_partial()

Split partial dependence data into continuous or categorical datasets

plot(<gg_partial>)

Plot a gg_partial object

gg_partial_rfsrc()

Partial dependence data from an rfsrc model

plot(<gg_partial_rfsrc>)

Plot a gg_partial_rfsrc object

gg_partialpro()

Split varpro partial dependence data into continuous or categorical datasets

plot(<gg_partialpro>)

Plot a gg_partialpro object

Survival Analysis

Survival curves, ROC, and related diagnostics.

gg_survival()

Nonparametric survival estimates.

plot(<gg_survival>)

Plot a gg_survival object.

gg_roc(<rfsrc>)

ROC (Receiver Operating Characteristic) curve data from a classification forest.

plot(<gg_roc>)

ROC plot generic function for a gg_roc object.

calc_roc(<rfsrc>)

Receiver Operator Characteristic calculator

calc_auc()

Area Under the ROC Curve calculator

surv_partial.rfsrc()

Survival partial dependence data for one or more predictors

kaplan()

nonparametric Kaplan-Meier estimates

nelson()

nonparametric Nelson-Aalen estimates

Utilities

Helper functions used internally and by users.

quantile_pts()

Quantile-based cut points for coplots

varpro_feature_names()

Recover original variable names from varpro one-hot encoded feature names

Package

ggRandomForests-package

ggRandomForests: Visually Exploring Random Forests